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  • W.B.C.S. Examination Notes On – General Science – Chemistry Notes – Glycolysis.

    Glycolysis is the central pathway for the glucose catabolism in which glucose (6-carbon compound) is converted into pyruvate (3-carbon compound) through a sequence of 10 steps.Continue Reading W.B.C.S. Examination Notes On – General Science – Chemistry Notes – Glycolysis.

    • Glycolysis takes place in both aerobic and anaerobic organisms and is the first step towards the metabolism of glucose.
    • The glycolytic sequence of reactions differs from one species to the other in the mechanism of its regulation and the subsequent metabolic fate of the pyruvate formed at the end of the process.
    • In aerobic organisms, glycolysis is the prelude to the citric acid cycle and the electron transport chain, which together release most of the energy contained in glucose.
    • It is also referred to as Embden-Meyerhof-Parnas or EMP pathway, in honor of the pioneer workers in the field.

    Glycolysis equation

    A summary of the process of glycolysis cab be written as follows:

    C6H12O6 + 2ADP + 2Pi + 2NAD+   →   2C3H4O3 + 2H2O + 2ATP + 2NADH + 2H+

    In words, the equation is written as:

    Glucose + Adenosine diphosphate + Phosphate  +  Nicotinamide adenine dinucleotide

    Pyruvate + Water + Adenosine triphosphate + Nicotinamide adenine dinucleotide + Hydrogen ions

    Glycolysis enzymes

    In most kinds of cells, the enzymes that catalyze glycolytic reactions are present in the extra-mitochondrial fraction of the cell in the cytosol. One common characteristic in all the enzymes involved in glycolysis is that nearly all of them require Mg2+. The following are the enzymes that catalyze different steps throughout the process of glycolysis:

    1. Hexokinase
    2. Phosphoglucoisomerase
    3. Phosphofructokinase
    4. Aldolase
    5. Phosphotriose isomerase
    6. Glyceraldehyde 3-phosphate dehydrogenase
    7. Phosphoglycerate kinase
    8. Phosphoglycerate mutase
    9. Enolase
    10. Pyruvate kinase

    Glycolysis steps

    • During glycolysis, a single mole of 6-carbon glucose is broken down into two moles of 3-carbon pyruvate by a sequence of 10 enzyme-catalyzed sequential reactions. These reactions are grouped under 2 phases, phase I and II.
    • Stage I comprises “preparatory” reactions which are not redox reactions and do not release energy but instead lead to the production of a critical intermediate of the pathway.
    • Stage I consists of the first five steps of the glycolysis process.
    • Similarly, in Stage II, redox reactions occur, energy is conserved in the form of ATP, and two molecules of pyruvate are formed.
    • The last five reactions of glycolysis constitute phase II.

    The ten steps of glycolysis occur in the following sequence:

    Step 1- Phosphorylation of glucose

    • In the first step of glycolysis, the glucose is initiated or primed for the subsequent steps by phosphorylation at the C6 carbon.
    • The process involves the transfer of phosphate from the ATP to glucose forming Glucose-6-phosphate in the presence of the enzyme hexokinase and glucokinase (in animals and microbes).
    • This step is also accompanied by considerable loss of energy as heat.

    Step 2- Isomerization of Glucose-6-phosphate

    • Glucose 6-phosphate is reversibly isomerized to fructose 6-phosphate by the enzyme phosphohexoisomerase/phosphoglucoisomerase.
    • This reaction involves a shift of the carbonyl oxygen from C1 to C2, thus converting an aldose into a ketose.

    Step 3- Phosphorylation of fructose-6-phosphate

    • This step is the second priming step of glycolysis, where fructose-6-phosphate is converted into fructose-1,6-bisphosphate in the presence of the enzyme phosphofructokinase.
    • Like in Step 1, the phosphate is transferred from ATP while some amount of energy is lost in the form of heat as well.

    Step 4- Cleavage of fructose 1, 6-diphosphate

    • This step involves the unique cleavage of the C-C bond in the fructose 1, 6-bisphosphate.
    • The enzyme fructose diphosphate aldolase catalyzes the cleavage of fructose 1,6-bisphosphate between C3 and C4 resulting in two different triose phosphates: glyceraldehyde 3-phosphate (an aldose) and dihydroxyacetone phosphate (a ketose).
    • The remaining steps in glycolysis involve three-carbon units, rather than six carbon units.

    Step 5- Isomerization of dihydroxyacetone phosphate

    • Glyceraldehyde 3-phosphate can be readily degraded in the subsequent steps of glycolysis, but dihydroxyacetone phosphate cannot be. Thus, it is isomerized into glyceraldehyde 3-phosphate instead.
    • In this step, dihydroxyacetone phosphate is isomerized into glyceraldehyde 3-phosphate in the presence of the enzyme triose phosphate isomerase.
    • This reaction completes the first phase of glycolysis.

    Step 6- Oxidative Phosphorylation of Glyceraldehyde 3-phosphate

    • Step 6 is one of the three energy-conserving or forming steps of glycolysis.
    • The glyceraldehyde 3-phosphate is converted into 1,3-bisphosphoglycerate by the enzyme glyceraldehyde 3-phosphate dehydrogenase (phosphoglyceraldehyde dehydrogenase).
    • In this process, NAD+ is reduced to coenzyme NADH by the H from glyceraldehydes 3-phosphate.
    • Since two moles of glyceraldehyde 3-phosphate are formed from one mole of glucose, two NADH are generated in this step.

    Step 7- Transfer of phosphate from 1, 3-diphosphoglycerate to ADP

    • This step is the ATP-generating step of glycolysis.
    • It involves the transfer of phosphate group from the 1, 3-bisphosphoglycerate to ADP by the enzyme phosphoglycerate kinase, thus producing ATP and 3-phosphoglycerate.
    • Since two moles of 1, 3-bisphosphoglycerate are formed from one mole of glucose, two ATPs are generated in this step.

    Step 8- Isomerization of 3-phosphoglycerate

    • The 3-phosphoglycerate is converted into 2-phosphoglycerate due to the shift of phosphoryl group from C3 to C2, by the enzyme phosphoglycerate mutase.
    • This is a reversible isomerization reaction.

    Step 9- Dehydration 2-phosphoglycerate

    • In this step, the 2-phosphoglycerate is dehydrated by the action of enolase (phosphopyruvate hydratase) to phosphoenolpyruvate.
    • This is also an irreversible reaction where two moles of water are lost.

    Step 10- Transfer of phosphate from phosphoenolpyruvate

    • This is the second energy-generating step of glycolysis.
    • Phosphoenolpyruvate is converted into an enol form of pyruvate by the enzyme pyruvate kinase.
    • The enol pyruvate, however, rearranges rapidly and non-enzymatically to yield the keto form of pyruvate (i.e. ketopyruvate). The keto form predominates at pH 7.0.
    • The enzyme catalyzes the transfer of a phosphoryl group from phosphoenolpyruvate to ADP, thus forming ATP.

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